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Changelog

Seqera Cloud v24.3.0_cycle4

note

From Wednesday, February 26, 2025, Seqera endpoints no longer support Windows XP and Safari versions 8 and below (including OSx 10.10 or older). This change is necessary to ensure the security and performance of our services. We recommend updating your operating system and browser version to ensure uninterrupted access to our services.

Affected endpoints:

  • cr.seqera.io
  • *.connect.cloud.seqera.io
  • intern.seqera.io
  • ai.seqera.io
  • hub.seqera.io
  • cloud.seqera.io
  • api.cloud.seqera.io
  • user-data.cloud.seqera.io
  • tower.nf
  • api.tower.nf
  • public.cr.seqera.io
  • auth.cr.seqera.io
  • wave.seqera.io
  • licenses.seqera.io
  • licman.seqera.io
  • api.multiqc.info

Feature updates and improvements

  • Studios
    • Add Studio session lifespan setting. This feature allows you to set a lifespan for a session, after which the session is stopped automatically.
    • Add Studios resource labels support. Workspace admins and owners can edit resource labels inherited from the compute environment and apply them to a Studio session. The edited resource labels associated with each session don’t affect the default resource labels associated with the compute environment.
  • Free tier
    • Reduce the maximum number of organization members to 3.
    • Resource tracking in the Platform UI for improved management of free tier limits.
    • User disable/re-enable is now supported.
  • Fusion
    • AWS Batch compute environments default to Amazon Linux 2023 AMI when Fusion v2 is enabled
  • Implement collapsible view for JSON workflow parameters tab and add View as YAML option.
  • Notify the user when secrets cleanup fails.
  • Update the pipeline name regular expression to allow pipeline names containing dots ('.').
  • Mark long-running jobs with a warning: This warning will be displayed when a workflow has been in the RUNNING state for more than 3 hours and no single task moved from one state to the next.
  • Set ECS_CONTAINER_START_TIMEOUT to 10 minutes in the ECS settings used by AWS Batch CEs in order to prevent the error Task failed to start - DockerTimeoutError: Could not transition to started; timed out after waiting 3m0s.
  • Upgrade to Angular 18

Bug fixes

  • Studios
    • Fixed an issue with searches for names containing special SQL wildcard characters (_, %).
    • Fixed an issue to ensure that the Maintain role is not able to change resource labels inherited from the selected compute environment when adding/starting a Studio.

Wave v1.18.1

Feature updates and improvements

Full changelog: https://github.com/seqeralabs/wave/compare/v1.18.0...v1.18.1

Wave v1.18.0

Feature updates and improvements

Full changelog: https://github.com/seqeralabs/wave/compare/v1.17.2...v1.18.0

Seqera Cloud v24.3.0-cycle3

Feature updates and improvements

  • Studios:
    • Display the applied date filter on the Dashboard page.
    • Add support for custom templates for input control options such as workspace visibility and session lifespan.
  • Fusion:
    • Default to Amazon Linux 2023 AMI when Fusion v2 is enabled.
    • Add support for Fusion licensing.
  • (Enterprise only) Add a job to save usage metrics to files so usage data can be accessed and shared by users even when they’re not connected to License Manager.
  • Implement FaviconService that changes the favicon based on pipeline run or Studio status.
  • Increase accessTokenExpirationTime by 10% to always trigger a token refresh when Platform is open in a browser tab that isn't hibernated.
  • Allow Nextflow configuration parameters with embedded references to other parameters to be shown verbatim.
  • Extend zombie jobs detection on all workflows reaching one of the terminal states (SUCCEEDED, FAILED, CANCELLED).

Bug fixes

  • Fixed an additional reference to the mainScript parameter in the pipeline-info API response.
  • Improved security of passthrough redirection on Platform authentication.

MultiQC v1.27.1

Fixes and improvements in AI summaries:

  • AI summaries should now work with bioconda install multiqc without additional dependencies
  • Supporting other LLM providers with a custom endpoint passed through the command line (docs)
  • Option to anonymize sample names